PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G222200.1.p
Common NamePRUPE_ppa015301mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 285aa    MW: 31833.4 Da    PI: 5.43
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G222200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.62.2e-08175222455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR +iN+++  L+ ++P +    sk +  a +L + ++Y++sLq
  Prupe.5G222200.1.p 175 SHSLAERVRRGKINERLRCLQNIVPGC----SKTMGMAVMLDEIINYVQSLQ 222
                         8*************************9....788*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-16169239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.19E-9169226No hitNo description
PROSITE profilePS5088814.704171221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-16171232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-5175222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-8177227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MAEFTADMQS IAPSLPFLDI APNTNMEPIN QYTDQFNPTV LDFYSSLNFQ TCMPFSNDNY  60
FSSQGPEFQG NLVQNFPNFF DHDNKSNQND EAPAVQHLVG AGVGNGFQES KKRRAMDDVS  120
EGSSGISTPP VSETGVKRKN SSGRGKRLKK SNEKEDEKPK DVVHVRARRG QATDSHSLAE  180
RVRRGKINER LRCLQNIVPG CSKTMGMAVM LDEIINYVQS LQNQVEFLSM KLTAASSFYD  240
FNSETDDMET MQSAKVYEAA ELERMKREGY GGYGSFHSTW PLNT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136148KRKNSSGRGKRLK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210857.10.0hypothetical protein PRUPE_ppa015301mg
SwissprotQ8GWK71e-62BEE3_ARATH; Transcription factor BEE 3
TrEMBLM5WFH90.0M5WFH9_PRUPE; Uncharacterized protein
STRINGPOPTR_0012s05210.11e-111(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.17e-64BR enhanced expression 3